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新增脚本filename_regulation_generator.py，有命名规范需要修改时，只需要修改ConfigParams.py的Filename类里面的变量的值，之后直接运行脚本filename_regulation_generator.py即可获取最新版本的数据结构化输入和输出命名规范.html

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Yorusora
2025-05-28 22:04:49 +08:00
parent ee4df5ee93
commit 13cf749a99
17 changed files with 1083 additions and 908 deletions
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41
func/Module_detect_Jpeak.py
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@ -11,8 +11,9 @@ from overrides import overrides
from pandas import read_csv, DataFrame
from yaml import dump, load, FullLoader
from func.utils.ConfigParams import Filename, Params
from func.utils.PublicFunc import PublicFunc
from func.utils.Constants import Constants, ConfigParams
from func.utils.Constants import Constants
from func.utils.Result import Result
from func.utils.detect_Jpeak import preprocess, Jpeak_Detection
@ -59,20 +60,20 @@ class SettingWindow(QMainWindow):
self.ui.pushButton_cancel.clicked.connect(self.close)
def __read_config__(self):
if not Path(ConfigParams.DETECT_JPEAK_CONFIG_FILE_PATH).exists():
with open(ConfigParams.DETECT_JPEAK_CONFIG_FILE_PATH, "w") as f:
dump(ConfigParams.DETECT_JPEAK_CONFIG_NEW_CONTENT, f)
if not Path(Params.DETECT_JPEAK_CONFIG_FILE_PATH).exists():
with open(Params.DETECT_JPEAK_CONFIG_FILE_PATH, "w") as f:
dump(Params.DETECT_JPEAK_CONFIG_NEW_CONTENT, f)
with open(ConfigParams.DETECT_JPEAK_CONFIG_FILE_PATH, "r") as f:
with open(Params.DETECT_JPEAK_CONFIG_FILE_PATH, "r") as f:
file_config = load(f.read(), Loader=FullLoader)
Config.update(file_config)
self.config = file_config
Config.update({
"Path": {
"Input": str((Path(self.root_path) / ConfigParams.PUBLIC_PATH_ORGBCG_TEXT /
"Input": str((Path(self.root_path) / Filename.PATH_ORGBCG_TEXT /
Path(str(self.sampID)))),
"Save": str((Path(self.root_path) / ConfigParams.PUBLIC_PATH_ORGBCG_TEXT /
"Save": str((Path(self.root_path) / Filename.PATH_ORGBCG_TEXT /
Path(str(self.sampID))))
}
})
@ -94,7 +95,7 @@ class SettingWindow(QMainWindow):
self.config["InputConfig"]["Freq"] = self.ui.spinBox_input_freq.value()
self.config["ModelFolderPath"] = self.ui.plainTextEdit_deepmodel_path.toPlainText()
with open(ConfigParams.DETECT_JPEAK_CONFIG_FILE_PATH, "w") as f:
with open(Params.DETECT_JPEAK_CONFIG_FILE_PATH, "w") as f:
dump(self.config, f)
self.close()
@ -105,18 +106,18 @@ class SettingWindow(QMainWindow):
def __update_ui__(self):
self.ui.plainTextEdit_file_path_input.setPlainText(
str((Path(self.root_path) /
ConfigParams.PUBLIC_PATH_ORGBCG_TEXT /
Filename.PATH_ORGBCG_TEXT /
Path(str(self.sampID)) /
Path(ConfigParams.BCG_FILTER +
Path(Filename.BCG_FILTER +
str(self.ui.spinBox_input_freq.value()) +
ConfigParams.ENDSWITH_TXT))))
Params.ENDSWITH_TXT))))
self.ui.plainTextEdit_file_path_save.setPlainText(
str((Path(self.root_path) /
ConfigParams.PUBLIC_PATH_PSG_TEXT /
Filename.PATH_PSG_TEXT /
Path(str(self.sampID)) /
Path(ConfigParams.JPEAK_REVISE +
Path(Filename.JPEAK_REVISE +
str(self.ui.spinBox_input_freq.value()) +
ConfigParams.ENDSWITH_TXT))))
Params.ENDSWITH_TXT))))
class MainWindow_detect_Jpeak(QMainWindow):
@ -169,7 +170,7 @@ class MainWindow_detect_Jpeak(QMainWindow):
self.fig.subplots_adjust(top=0.98, bottom=0.05, right=0.98, left=0.1, hspace=0, wspace=0)
self.ax0 = self.fig.add_subplot(self.gs[0])
self.ax0.grid(True)
self.ax0.xaxis.set_major_formatter(ConfigParams.FORMATTER)
self.ax0.xaxis.set_major_formatter(Params.FORMATTER)
PublicFunc.__resetAllButton__(self, ButtonState)
@ -355,7 +356,7 @@ class MainWindow_detect_Jpeak(QMainWindow):
PublicFunc.progressbar_update(self, 1, 1, Constants.SAVING_DATA, 0)
total_rows = len(DataFrame(self.data.peak.reshape(-1)))
chunk_size = ConfigParams.DETECT_JPEAK_SAVE_CHUNK_SIZE
chunk_size = Params.DETECT_JPEAK_SAVE_CHUNK_SIZE
with open(Config["Path"]["Save"], 'w') as f:
for start in range(0, total_rows, chunk_size):
end = min(start + chunk_size, total_rows)
@ -379,7 +380,7 @@ class MainWindow_detect_Jpeak(QMainWindow):
def reset_axes(self):
self.ax0.clear()
self.ax0.grid(True)
self.ax0.xaxis.set_major_formatter(ConfigParams.FORMATTER)
self.ax0.xaxis.set_major_formatter(Params.FORMATTER)
def update_ui_comboBox_model(self, model_list):
self.ui.comboBox_model.clear()
@ -398,18 +399,18 @@ class Data:
if Path(Config["Path"]["Input"]).is_file():
Config["Path"]["Input"] = str(Path(Config["Path"]["Input"]).parent)
result = PublicFunc.examine_file(Config["Path"]["Input"], ConfigParams.BCG_FILTER, ConfigParams.ENDSWITH_TXT)
result = PublicFunc.examine_file(Config["Path"]["Input"], Filename.BCG_FILTER, Params.ENDSWITH_TXT)
if result.status:
Config["Path"]["Input"] = result.data["path"]
Config["InputConfig"]["Freq"] = result.data["freq"]
Config["Path"]["Save"] = str(
Path(Config["Path"]["Save"]) / Path(ConfigParams.JPEAK_REVISE + str(Config["InputConfig"]["Freq"]) + ConfigParams.ENDSWITH_TXT))
Path(Config["Path"]["Save"]) / Path(Filename.JPEAK_REVISE + str(Config["InputConfig"]["Freq"]) + Params.ENDSWITH_TXT))
else:
return result
try:
self.raw_data = read_csv(Config["Path"]["Input"],
encoding=ConfigParams.UTF8_ENCODING,
encoding=Params.UTF8_ENCODING,
header=None).to_numpy().reshape(-1)
except Exception as e:
return Result().failure(info=Constants.INPUT_FAILURE +