1、完善命名规范
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# 文件命名规范
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### 当一份数据被完整走完标注流程后,数据文件夹目录结构将会是:
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```
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.../Label/<sampID>
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|-Artifact_a.txt
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@ -49,6 +51,7 @@
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|-Flow Patient_Raw_采样率.txt
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|-Snore_Raw_采样率.txt
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|-SpO2_Raw_采样率.txt
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|-StartTime_Raw.txt
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.../PSG_Origin/<sampID>
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|-...
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.../Receive_Origin
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@ -57,33 +60,43 @@
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|-...
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```
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### 1 数据粗同步
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输入:
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原始orgBcg信号:`./OrgBCG_Text/<sampID>/orgBcg_Raw_采样率.txt`
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原始PSG信号:`./PSG_Text/<sampID>/Axxxxxxx.edf`
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输出:
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粗同步后的位置索引:`./Sync_Index/<sampID>/Approximately_Align_Info.csv`
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### 2 预处理
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输入:
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原始orgBcg信号:`./OrgBCG_Text/<sampID>/orgBcg_Raw_采样率.txt`
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原始ECG信号:`./PSG_Text/<sampID>/ECG II_Raw_采样率.txt`
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输出:
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带通滤波BCG信号:`./OrgBCG_Text/<sampID>/BCG_Raw_采样率.txt`
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滤波后的ECG信号:`./PSG_Text/<sampID>/ECG_Raw_采样率.txt`
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### 3 数据精同步
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#### 3.1 算法定位
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#### 3.1.1 R峰算法定位
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输入:
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@ -94,8 +107,10 @@
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算法定位的R峰坐标:`./PSG_Text/<sampID>/Rpeak_final.txt`
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#### 3.1.2 J峰算法定位
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输入:
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带通滤波BCG信号:`./OrgBCG_Text/<sampID>/BCG_Raw_采样率.txt`
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@ -104,92 +119,129 @@
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算法定位的J峰坐标:`./OrgBCG_Text/<sampID>/JPeak_revise.txt`
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#### 3.2 人工纠正
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#### 3.2.1 R峰人工纠正
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输入:
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滤波后的ECG信号:`./PSG_Text/<sampID>/ECG_Raw_采样率.txt`
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算法定位的R峰坐标:`./PSG_Text/<sampID>/Rpeak_final.txt`
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输出:
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人工纠正后的R峰坐标:`./PSG_Text/<sampID>/Rpeak_final_corrected.txt`
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#### 3.2.2 J峰人工纠正*
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输入:
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带通滤波BCG信号:`./OrgBCG_Text/<sampID>/BCG_Raw_采样率.txt`
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算法定位的J峰坐标:`./OrgBCG_Text/<sampID>/JPeak_revise.txt`
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输出:
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人工纠正后的J峰坐标:`./OrgBCG_Text/<sampID>/JPeak_revise_corrected.txt`
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#### 3.3 数据片段起止对齐、数据采样率同步
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输入:
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滤波后的ECG信号:`./PSG_Text/<sampID>/ECG_Raw_采样率.txt`
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人工纠正后的R峰坐标:`./PSG_Text/<sampID>/Rpeak_final_corrected.txt`
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带通滤波BCG信号:`./OrgBCG_Text/<sampID>/BCG_Raw_采样率.txt`
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人工纠正后的J峰坐标:`./OrgBCG_Text/<sampID>/JPeak_revise_corrected.txt`
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原始orgBcg信号:`./OrgBCG_Text/<sampID>/orgBcg_Raw_采样率.txt`
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输出:
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PSG的对齐信息:`./PSG_Aligned/<sampID>/Align_info.txt`
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同步后的ECG信号:`./PSG_Aligned/<sampID>/ECG_Sync_采样率.txt`
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同步后的R峰坐标:`./PSG_Aligned/<sampID>/Rpeak_Sync.txt`
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BCG的对齐信息:`./OrgBCG_Aligned/<sampID>/Align_info.txt`
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同步后的BCG信号:`./OrgBCG_Aligned/<sampID>/BCG_Sync_采样率.txt`
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同步后的orgBcg信号:`./OrgBCG_Aligned/<sampID>/orgBcg_Sync_采样率.txt`
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同步后的J峰坐标:`./OrgBCG_Aligned/<sampID>/Jpeak_Sync.txt`
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#### 3.4、冗余数据切割、标签映射
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输入:
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PSG的对齐信息:`./PSG_Aligned/<sampID>/Align_info.txt`
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BCG的对齐信息:`./OrgBCG_Aligned/<sampID>/Align_info.txt`
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原始的其他PSG通道信号:`./PSG_Text/<sampID>/通道名_Raw_采样率.txt`(通道名包括:Effort Abd, Effort Tho, Flow Patient, Snore, SpO2)
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原始的睡眠分期标签:`./PSG_Text/<sampID>/5_class_Raw_1.txt`
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原始的睡眠呼吸暂停事件标签:`./PSG_Text/<sampID>/SA Label_Raw.csv`
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输出:
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同步后的其他PSG通道信号:`./PSG_Aligned/<sampID>/通道名_Sync_采样率.txt`(通道名包括:Effort Abd, Effort Tho, Flow Patient, Snore, SpO2)
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同步后的睡眠分期标签:`./PSG_Aligned/<sampID>/5_class_Sync_1.txt`
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同步后的睡眠呼吸暂停事件标签:`./PSG_Aligned/<sampID>/SA Label_Sync.csv`
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### 4 体动标记
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输入:
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同步后的BCG信号:`./OrgBCG_Aligned/<sampID>/BCG_Sync_采样率.txt`
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同步后的orgBcg信号:`./OrgBCG_Aligned/<sampID>/orgBcg_Sync_采样率.txt`
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输出:
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txt格式的体动标签:`./Label/<sampID>/Artifact_a.txt`
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体动标签类型数量统计:`./Label/<sampID>/Artifact_b.txt`
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csv格式的体动标签:`./Label/<sampID>/Artifact_c.csv`
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### 5 质量评估
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输入:
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同步后的BCG信号:`./OrgBCG_Aligned/<sampID>/BCG_Sync_采样率.txt`
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txt格式的体动标签:`./Label/<sampID>/Artifact_a.txt`
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输出:
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质量标签:`./Label/<sampID>/SQ_label_10s.csv`或`./Label/<sampID>/SQ_label_30s.csv`
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### 6 心搏定位数据标注
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输入:
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?
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@ -198,33 +250,48 @@ txt格式的体动标签:`./Label/<sampID>/Artifact_a.txt`
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?
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### 7 呼吸提取
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输入:
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同步后的orgBcg信号:`./OrgBCG_Aligned/<sampID>/orgBcg_Sync_采样率.txt`
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同步后的THO信号:`./PSG_Aligned/<sampID>/Effort Tho_Sync_采样率.txt`
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txt格式的体动标签:`./Label/<sampID>/Artifact_a.txt`
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输出:
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呼吸可用性标签:`./Label/<sampID>/Resp_quality_label.txt`
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THO信号呼吸间期标签:`./Label/<sampID>/Tho_peak.txt`
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### 8 呼吸暂停事件标注
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输入:
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同步后的orgBcg信号:`./OrgBCG_Aligned/<sampID>/orgBcg_Sync_采样率.txt`
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txt格式的体动标签:`./Label/<sampID>/Artifact_a.txt`
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同步后的FlowT信号:`./PSG_Aligned/<sampID>/Effort Tho_Sync_采样率.txt`
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同步后的FlowP信号:`./PSG_Aligned/<sampID>/Effort Tho_Sync_采样率.txt`
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同步后的THO信号:`./PSG_Aligned/<sampID>/Effort Tho_Sync_采样率.txt`
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同步后的ABD信号:`./PSG_Aligned/<sampID>/Effort Abd_Sync_采样率.txt`
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同步后的SpO2信号:`./PSG_Aligned/<sampID>/SpO2_Sync_采样率.txt`
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同步后的呼吸暂停标签:`./PSG_Aligned/<sampID>/SA Label_Sync.csv`
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输出:
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修正后的呼吸暂停标签:`./Label/<sampID>/SA Label_corrected.csv`
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新增的呼吸暂停标签:`./Label/<sampID>/SA Label_add.csv`
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