Compare commits

...

2 Commits

View File

@ -1645,9 +1645,6 @@ class Data:
self.correlation_align_point_match_ECG = array([]).astype(int) self.correlation_align_point_match_ECG = array([]).astype(int)
self.correlation_align_point_match_BCG = array([]).astype(int) self.correlation_align_point_match_BCG = array([]).astype(int)
self.argmax_BCG = None
self.argmax_ECG = None
def open_file(self): def open_file(self):
if Path(Config["Path"]["Input_OrgBCG"]).is_file(): if Path(Config["Path"]["Input_OrgBCG"]).is_file():
Config["Path"]["Input_OrgBCG"] = str(Path(Config["Path"]["Input_OrgBCG"]).parent) Config["Path"]["Input_OrgBCG"] = str(Path(Config["Path"]["Input_OrgBCG"]).parent)
@ -1740,8 +1737,6 @@ class Data:
self.Rpeak = read_csv(Config["Path"]["Input_Rpeak"], self.Rpeak = read_csv(Config["Path"]["Input_Rpeak"],
encoding=Params.UTF8_ENCODING, encoding=Params.UTF8_ENCODING,
header=None).to_numpy().reshape(-1) header=None).to_numpy().reshape(-1)
self.argmax_BCG = np_argmax(self.raw_BCG)
self.argmax_ECG = np_argmax(self.raw_ECG)
except Exception as e: except Exception as e:
return Result().failure(info=Constants.INPUT_FAILURE + return Result().failure(info=Constants.INPUT_FAILURE +
Constants.FAILURE_REASON["Open_Data_Exception"] + "\n" + format_exc()) Constants.FAILURE_REASON["Open_Data_Exception"] + "\n" + format_exc())
@ -1949,55 +1944,63 @@ class Data:
def correlation_align(self, mode): def correlation_align(self, mode):
try: try:
if mode == "init": if mode == "init":
anchor0 = [Config["front"]["anchor_R"], Config["front"]["anchor_J"]] Config["orgfs"] = ((int(Config["back"]["anchor_J"]) - int(Config["front"]["anchor_J"])) * Config["InputConfig"]["UseFreq"] /
anchor1 = [Config["back"]["anchor_R"], Config["back"]["anchor_J"]] (int(Config["back"]["anchor_R"]) - int(Config["front"]["anchor_R"])))
Config["orgfs"] = ((int(anchor1[1]) - int(anchor0[1])) * Config["InputConfig"]["UseFreq"] / Config["offset_anchor"] = Config["front"]["anchor_R"] - Config["front"]["anchor_J"]
(int(anchor1[0]) - int(anchor0[0])))
Config["offset_anchor"] = anchor0[0] - anchor0[1]
orgfs = Config["orgfs"]
off = Config["offset_anchor"]
self.res_orgBcg = self.raw_orgBcg.copy() self.res_orgBcg = self.raw_orgBcg.copy()
self.res_BCG = self.raw_BCG.copy() self.res_BCG = self.raw_BCG.copy()
self.cut_ECG = self.raw_ECG.copy() self.cut_ECG = self.raw_ECG.copy()
self.cut_Rpeak = self.Rpeak.copy() self.cut_Rpeak = self.Rpeak.copy()
if off > 0: Config["frontcut_index_BCG"], Config["frontcut_index_ECG"] = 0, 0
self.cut_ECG = self.cut_ECG[off:]
anchor0[0] = anchor0[0] - off if Config["offset_anchor"] > 0:
anchor1[0] = anchor1[0] - off self.cut_ECG = self.cut_ECG[Config["offset_anchor"]:]
idxs = where(self.cut_Rpeak > off)[0] Config["front"]["anchor_R"] = Config["front"]["anchor_R"] - Config["offset_anchor"]
self.cut_Rpeak = self.cut_Rpeak[idxs] - off Config["back"]["anchor_R"] = Config["back"]["anchor_R"] - Config["offset_anchor"]
idxs = where(self.cut_Rpeak > Config["offset_anchor"])[0]
self.cut_Rpeak = self.cut_Rpeak[idxs] - Config["offset_anchor"]
Config["frontcut_index_ECG"] += Config["offset_anchor"]
else: else:
self.res_BCG = self.res_BCG[-off:] self.res_BCG = self.res_BCG[-Config["offset_anchor"]:]
self.res_orgBcg = self.res_orgBcg[-off:] self.res_orgBcg = self.res_orgBcg[-Config["offset_anchor"]:]
anchor0[1] = anchor0[1] + off Config["front"]["anchor_J"] = Config["front"]["anchor_J"] + Config["offset_anchor"]
anchor1[1] = anchor1[1] + off Config["back"]["anchor_J"] = Config["back"]["anchor_J"] + Config["offset_anchor"]
Config["frontcut_index_BCG"] -= Config["offset_anchor"]
self.res_BCG = resample(self.res_BCG, orgfs, Config["InputConfig"]["UseFreq"]) self.res_BCG = resample(self.res_BCG, Config["orgfs"], Config["InputConfig"]["UseFreq"])
self.res_orgBcg = resample(self.res_orgBcg, orgfs, Config["InputConfig"]["UseFreq"]) self.res_orgBcg = resample(self.res_orgBcg, Config["orgfs"], Config["InputConfig"]["UseFreq"])
anchor0[1] = round(int(anchor0[1]) * Config["InputConfig"]["UseFreq"] / orgfs) Config["front"]["anchor_J"] = round(int(Config["front"]["anchor_J"]) * Config["InputConfig"]["UseFreq"] / Config["orgfs"])
anchor1[1] = round(int(anchor1[1]) * Config["InputConfig"]["UseFreq"] / orgfs) Config["back"]["anchor_J"] = round(int(Config["back"]["anchor_J"]) * Config["InputConfig"]["UseFreq"] / Config["orgfs"])
off = anchor1[0] - anchor1[1] Config["offset_anchor"] = Config["back"]["anchor_R"] - Config["back"]["anchor_J"]
if off > 0: if Config["offset_anchor"] > 0:
self.cut_ECG = self.cut_ECG[off:] self.cut_ECG = self.cut_ECG[Config["offset_anchor"]:]
anchor0[0] = anchor0[0] - off Config["front"]["anchor_R"] = Config["front"]["anchor_R"] - Config["offset_anchor"]
anchor1[0] = anchor1[0] - off Config["back"]["anchor_R"] = Config["back"]["anchor_R"] - Config["offset_anchor"]
idxs = where(self.cut_Rpeak > off)[0] idxs = where(self.cut_Rpeak > Config["offset_anchor"])[0]
self.cut_Rpeak = self.cut_Rpeak[idxs] - off self.cut_Rpeak = self.cut_Rpeak[idxs] - Config["offset_anchor"]
Config["frontcut_index_ECG"] += Config["offset_anchor"] * Config["orgfs"] / Config["InputConfig"]["UseFreq"]
else: else:
self.res_BCG = self.res_BCG[-off:] self.res_BCG = self.res_BCG[-Config["offset_anchor"]:]
self.res_orgBcg = self.res_orgBcg[-off:] self.res_orgBcg = self.res_orgBcg[-Config["offset_anchor"]:]
anchor0[1] = anchor0[1] + off Config["front"]["anchor_J"] = Config["front"]["anchor_J"] + Config["offset_anchor"]
anchor1[1] = anchor1[1] + off Config["back"]["anchor_J"] = Config["back"]["anchor_J"] + Config["offset_anchor"]
Config["frontcut_index_BCG"] -= Config["offset_anchor"] * Config["orgfs"] / Config["InputConfig"]["UseFreq"]
datalen = np_min([len(self.cut_ECG), len(self.res_BCG)]) datalen = np_min([len(self.cut_ECG), len(self.res_BCG)])
self.cut_ECG = self.cut_ECG[:datalen] self.cut_ECG = self.cut_ECG[:datalen]
self.res_BCG = self.res_BCG[:datalen] self.res_BCG = self.res_BCG[:datalen]
self.res_orgBcg = self.res_orgBcg[:datalen] self.res_orgBcg = self.res_orgBcg[:datalen]
Config["frontcut_index_BCG"] = int(Config["frontcut_index_BCG"])
Config["frontcut_index_ECG"] = int(Config["frontcut_index_ECG"])
Config["backcut_index_BCG"] = int(Config["frontcut_index_BCG"] + datalen)
Config["backcut_index_ECG"] = int(Config["frontcut_index_ECG"] + datalen)
a = np_max([np_max(self.cut_ECG), np_max(self.res_BCG)]) a = np_max([np_max(self.cut_ECG), np_max(self.res_BCG)])
b = np_min([np_min(self.cut_ECG), np_min(self.res_BCG)]) b = np_min([np_min(self.cut_ECG), np_min(self.res_BCG)])
peak_ECG, _ = find_peaks(self.cut_ECG) peak_ECG, _ = find_peaks(self.cut_ECG)
@ -2009,8 +2012,8 @@ class Data:
result = { result = {
"res_BCG": self.res_BCG, "res_BCG": self.res_BCG,
"cut_ECG": self.cut_ECG, "cut_ECG": self.cut_ECG,
"anchor00": anchor0[0], "anchor00": Config["front"]["anchor_R"],
"anchor10": anchor1[0], "anchor10": Config["back"]["anchor_R"],
"a": a, "a": a,
"b": b, "b": b,
"peak_ECG": peak_ECG, "peak_ECG": peak_ECG,
@ -2034,38 +2037,41 @@ class Data:
def data_postprocess(self): def data_postprocess(self):
try: try:
if len(self.correlation_align_point_match_ECG) != 2 and len(self.correlation_align_point_match_BCG) != 2: if len(self.correlation_align_point_match_ECG) != 2 and len(self.correlation_align_point_match_BCG) != 2:
off = 0 Config["offset_anchor"] = 0
else: else:
self.correlation_align_point_match_ECG.sort() self.correlation_align_point_match_ECG.sort()
self.correlation_align_point_match_BCG.sort() self.correlation_align_point_match_BCG.sort()
off = round(((int(self.correlation_align_point_match_ECG[1]) - int( Config["offset_anchor"] = round(((int(self.correlation_align_point_match_ECG[1]) - int(
self.correlation_align_point_match_BCG[1])) + (int(self.correlation_align_point_match_ECG[0]) - int( self.correlation_align_point_match_BCG[1])) + (int(self.correlation_align_point_match_ECG[0]) - int(
self.correlation_align_point_match_BCG[0]))) / 2) self.correlation_align_point_match_BCG[0]))) / 2)
anchor0 = [Config["front"]["anchor_R"], Config["front"]["anchor_J"]] if Config["offset_anchor"] > 0:
anchor1 = [Config["back"]["anchor_R"], Config["back"]["anchor_J"]] self.cut_ECG = self.cut_ECG[Config["offset_anchor"]:]
Config["front"]["anchor_R"] = Config["front"]["anchor_R"] - Config["offset_anchor"]
if off > 0: Config["back"]["anchor_R"] = Config["back"]["anchor_R"] - Config["offset_anchor"]
self.cut_ECG = self.cut_ECG[off:] self.cut_Rpeak = self.cut_Rpeak[where(self.cut_Rpeak > Config["offset_anchor"])[0]] - Config["offset_anchor"]
anchor0[0] = anchor0[0] - off Config["frontcut_index_ECG"] += Config["offset_anchor"] * Config["orgfs"] / Config["InputConfig"]["UseFreq"]
anchor1[0] = anchor1[0] - off
self.cut_Rpeak = self.cut_Rpeak[where(self.cut_Rpeak > off)[0]] - off
else: else:
self.res_BCG = self.res_BCG[-off:] self.res_BCG = self.res_BCG[-Config["offset_anchor"]:]
self.res_orgBcg = self.res_orgBcg[-off:] self.res_orgBcg = self.res_orgBcg[-Config["offset_anchor"]:]
anchor0[1] = anchor0[1] + off Config["front"]["anchor_J"] = Config["front"]["anchor_J"] + Config["offset_anchor"]
anchor1[1] = anchor1[1] + off Config["back"]["anchor_J"] = Config["back"]["anchor_J"] + Config["offset_anchor"]
Config["frontcut_index_BCG"] -= Config["offset_anchor"] * Config["orgfs"] / Config["InputConfig"]["UseFreq"]
datalen = np_min([len(self.cut_ECG), len(self.res_BCG)]) datalen = np_min([len(self.cut_ECG), len(self.res_BCG)])
self.cut_ECG = self.cut_ECG[:datalen] self.cut_ECG = self.cut_ECG[:datalen]
self.res_BCG = self.res_BCG[:datalen] self.res_BCG = self.res_BCG[:datalen]
self.res_orgBcg = self.res_orgBcg[:datalen] self.res_orgBcg = self.res_orgBcg[:datalen]
Config["frontcut_index_BCG"] = int(Config["frontcut_index_BCG"])
Config["frontcut_index_ECG"] = int(Config["frontcut_index_ECG"])
Config["backcut_index_BCG"] = int(Config["frontcut_index_BCG"] + datalen)
Config["backcut_index_ECG"] = int(Config["frontcut_index_ECG"] + datalen)
idxs = where(self.cut_Rpeak < datalen)[0] idxs = where(self.cut_Rpeak < datalen)[0]
self.cut_Rpeak = self.cut_Rpeak[idxs] self.cut_Rpeak = self.cut_Rpeak[idxs]
Config["offset_correct"] = off
self.cut_Jpeak = [] self.cut_Jpeak = []
peaks, _ = find_peaks(self.res_BCG) peaks, _ = find_peaks(self.res_BCG)
for i in self.cut_Rpeak: for i in self.cut_Rpeak:
@ -2074,22 +2080,11 @@ class Data:
self.cut_Jpeak.append(peaks[idx]) self.cut_Jpeak.append(peaks[idx])
self.cut_Jpeak = asarray(self.cut_Jpeak).astype(int) self.cut_Jpeak = asarray(self.cut_Jpeak).astype(int)
frontcut_index_BCG = int(
(self.argmax_BCG - np_argmax(self.res_BCG) / Config["InputConfig"]["UseFreq"] * Config["orgfs"]))
backcut_index_BCG = int(len(self.res_BCG) / Config["InputConfig"]["UseFreq"] * Config["orgfs"] + np_argmax(
self.raw_BCG) - np_argmax(self.res_BCG) / Config["InputConfig"]["UseFreq"] * Config["orgfs"])
frontcut_index_ECG = self.argmax_ECG - np_argmax(self.cut_ECG)
backcut_index_ECG = len(self.cut_ECG) + self.argmax_ECG - np_argmax(self.cut_ECG)
Config["frontcut_index_BCG"] = frontcut_index_BCG
Config["backcut_index_BCG"] = backcut_index_BCG
Config["frontcut_index_ECG"] = frontcut_index_ECG
Config["backcut_index_ECG"] = backcut_index_ECG
except Exception as e: except Exception as e:
return Result().failure(info=Constants.PRECISELY_ALIGN_POSTPROCESS_VIEW_FAILURE + return Result().failure(info=Constants.PRECISELY_ALIGN_POSTPROCESS_VIEW_FAILURE +
Constants.FAILURE_REASON["PostProcess_Align_Exception"] + "\n" + format_exc()) Constants.FAILURE_REASON["PostProcess_Align_Exception"] + "\n" + format_exc())
info = f"{Constants.PRECISELY_ALIGN_POSTPROCESS_VIEW_FINISHED}BCG前后段被切割的坐标值为[{frontcut_index_BCG}, {backcut_index_BCG}]ECG前后段被切割的坐标值为[{frontcut_index_ECG}, {backcut_index_ECG}]" info = f"{Constants.PRECISELY_ALIGN_POSTPROCESS_VIEW_FINISHED}BCG前后段被切割的坐标值为[{Config['frontcut_index_BCG']}, {Config['backcut_index_BCG']}]ECG前后段被切割的坐标值为[{Config['frontcut_index_ECG']}, {Config['backcut_index_ECG']}]"
return Result().success(info=info) return Result().success(info=info)
def save_alignInfo(self): def save_alignInfo(self):